Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014521.1 Corchorus capsularis cultivar CVL-1 contig14542, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23123

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4776--4812
1
37.0
1
94
0
65
97
0
0
2
0.18
7509--7569
27
2.2
27
97
2
113
54
6
32
6
1.52
16439--16471
2
16.5
2
100
0
66
48
0
0
51
1.00
17394--17435
21
2.0
21
90
0
66
23
23
4
47
1.70
21024--21056
2
17.0
2
93
6
59
51
0
0
48
1.00
21163--21193
2
15.5
2
100
0
62
48
0
0
51
1.00
22563--22605
19
2.3
19
95
0
77
37
2
4
55
1.33

Tables:   1

The End!