Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014524.1 Corchorus capsularis cultivar CVL-1 contig14545, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28722

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4768--4873
31
3.5
30
74
5
97
40
16
16
27
1.89
4771--4935
60
2.8
60
85
3
181
38
16
17
27
1.92
4795--4937
60
2.4
60
86
2
189
38
16
18
26
1.92
9571--9703
66
2.0
67
85
1
178
15
12
15
56
1.68
18202--18369
83
2.0
83
97
0
318
20
20
12
46
1.83
21657--21687
6
5.2
6
100
0
62
16
35
16
32
1.91
21657--21699
18
2.4
18
88
3
61
20
32
13
32
1.92
28685--28722
2
19.0
2
100
0
76
50
0
50
0
1.00

Tables:   1

The End!