Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014528.1 Corchorus capsularis cultivar CVL-1 contig14549, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13007

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1651--1677
14
1.9
14
100
0
54
48
0
0
51
1.00
1649--1708
27
2.1
27
82
11
68
43
0
0
56
0.99
1661--1716
28
2.0
29
86
13
82
44
0
0
55
0.99
1968--2121
31
5.3
31
75
13
128
17
23
26
32
1.97
2019--2121
53
1.9
53
88
0
152
16
21
27
34
1.95
5358--6360
502
2.0
502
95
0
1819
27
12
17
42
1.85
11133--13006
333
5.6
334
80
6
1898
35
13
14
36
1.85
12716--12740
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!