Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014529.1 Corchorus capsularis cultivar CVL-1 contig14550, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27617

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4403--4538
33
4.2
32
85
4
166
13
38
35
12
1.83
4543--4681
34
4.2
33
82
3
165
12
32
38
15
1.86
5272--5317
21
2.2
21
84
0
56
47
15
6
30
1.70
9542--9612
29
2.4
29
81
6
81
42
14
21
22
1.88
11963--11995
14
2.4
14
94
0
57
21
9
27
42
1.83
13705--13762
29
1.9
29
86
6
80
41
6
22
29
1.80
13700--13801
31
3.4
29
77
6
78
40
10
18
30
1.85
16644--18432
309
5.6
319
74
11
871
34
14
15
35
1.88
17636--18432
319
2.6
309
79
7
774
34
14
15
35
1.88
16652--18442
628
2.8
616
78
8
1749
34
14
15
35
1.88
21982--22012
12
2.6
12
94
0
53
6
9
0
83
0.79

Tables:   1

The End!