Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014534.1 Corchorus capsularis cultivar CVL-1 contig14555, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52440

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5180--5216
2
18.5
2
100
0
74
51
0
0
48
1.00
14688--14758
32
2.2
31
92
7
124
14
30
35
19
1.91
15949--15979
13
2.4
13
94
0
53
41
0
19
38
1.51
16850--16882
15
2.2
15
89
10
50
81
3
12
3
0.91
17889--17916
3
9.3
3
100
0
56
0
32
0
67
0.91
19752--19782
12
2.6
12
89
0
53
38
0
12
48
1.42
30174--30259
42
2.0
42
93
0
145
19
40
23
16
1.91
34774--34800
10
2.7
10
100
0
54
33
37
29
0
1.58
44848--44872
12
2.1
12
100
0
50
24
28
8
40
1.83
47207--47243
1
37.0
1
94
0
65
97
0
0
2
0.18
50851--50875
6
4.2
6
100
0
50
16
0
0
84
0.63
51550--51574
6
4.2
6
100
0
50
16
36
32
16
1.90

Tables:   1

The End!