Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014536.1 Corchorus capsularis cultivar CVL-1 contig14557, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68002

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13189--13222
2
17.0
2
100
0
68
50
0
0
50
1.00
16699--16814
60
1.9
60
91
0
187
24
18
17
39
1.92
17318--17343
2
13.0
2
100
0
52
50
0
0
50
1.00
26858--26891
11
3.2
11
87
4
52
52
0
0
47
1.00
26862--26891
15
2.0
15
93
0
51
50
0
0
50
1.00
27802--27839
14
2.7
14
88
11
60
18
26
15
39
1.91
29989--30026
15
2.6
14
88
8
58
10
10
0
78
0.95
29995--30026
15
2.1
15
100
0
64
12
6
0
81
0.87
30743--30796
1
54.0
1
88
0
81
0
0
5
94
0.31
34063--34118
28
2.0
28
100
0
112
42
7
25
25
1.80
45483--45564
42
2.0
42
97
0
155
25
40
24
9
1.86
47288--47313
7
3.7
7
100
0
52
46
11
0
42
1.40
51555--51592
17
2.3
16
90
4
58
50
13
0
36
1.42
67965--67999
2
17.5
2
100
0
70
51
0
0
48
1.00

Tables:   1

The End!