Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014538.1 Corchorus capsularis cultivar CVL-1 contig14559, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46266

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7781--7846
24
2.8
24
88
0
96
53
0
40
6
1.26
7831--7864
3
11.3
3
87
0
50
58
0
38
2
1.13
9666--9730
32
2.0
32
84
3
85
26
1
16
55
1.50
10140--10330
32
5.9
33
88
4
246
12
30
41
15
1.84
14679--14713
2
17.5
2
100
0
70
51
0
0
48
1.00
32600--32625
13
2.0
13
100
0
52
53
7
15
23
1.67
34556--34596
20
2.1
20
90
4
66
31
39
9
19
1.84
34867--35008
76
1.9
76
83
5
189
50
23
16
9
1.74
36293--36367
21
3.7
21
72
13
77
60
4
4
32
1.34
41203--41281
39
2.0
39
92
0
131
50
6
24
18
1.70
43728--43763
10
3.8
9
86
13
54
58
11
30
0
1.33
44971--44999
2
14.5
2
100
0
58
51
0
0
48
1.00
45747--45834
33
2.7
33
85
0
113
13
31
37
17
1.88

Tables:   1

The End!