Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014540.1 Corchorus capsularis cultivar CVL-1 contig14561, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6683

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
163--498
52
6.4
52
95
1
600
32
21
23
23
1.98
2291--3451
321
3.6
322
83
3
1494
34
15
15
34
1.89
3452--3479
2
14.0
2
100
0
56
50
0
0
50
1.00
4821--4873
23
2.3
23
90
3
81
30
20
9
39
1.84
6250--6553
144
2.1
147
86
3
427
31
22
16
29
1.96
6494--6603
39
2.8
40
87
2
150
30
38
17
14
1.89

Tables:   1

The End!