Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014545.1 Corchorus capsularis cultivar CVL-1 contig14566, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27943

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
650--682
7
4.7
7
100
0
66
0
15
0
84
0.61
723--761
3
12.3
3
94
5
60
61
0
0
38
0.96
726--767
17
2.5
17
85
11
52
59
4
0
35
1.19
4002--4273
142
1.9
144
93
1
476
39
15
18
27
1.90
21693--21733
12
3.4
12
86
0
55
17
41
4
36
1.71
21703--21772
24
2.9
24
73
0
68
14
41
7
37
1.73
25499--25566
34
1.9
36
85
5
95
64
13
2
19
1.40
26407--26461
3
18.3
3
100
0
110
67
0
0
32
0.91

Tables:   1

The End!