Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014548.1 Corchorus capsularis cultivar CVL-1 contig14569, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24708

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7106--7146
20
2.0
20
86
9
57
63
0
29
7
1.21
7109--7140
16
1.9
17
93
6
57
65
0
28
6
1.16
9500--9536
15
2.3
15
90
9
56
78
0
2
18
0.87
12754--12784
1
31.0
1
100
0
62
0
0
0
100
0.00
14009--14176
31
5.6
30
69
16
132
33
19
20
26
1.96
14013--14175
60
2.7
60
91
1
265
34
19
20
25
1.96
14203--14367
60
2.8
60
89
0
267
26
19
19
34
1.96
14210--14371
31
5.4
31
69
16
133
27
18
19
34
1.95
16222--16271
25
2.0
25
85
11
68
22
6
6
66
1.36

Tables:   1

The End!