Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014553.1 Corchorus capsularis cultivar CVL-1 contig14574, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8564

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
412--3218
331
8.6
330
88
4
3818
32
15
14
37
1.88
412--3218
658
4.3
659
87
4
3893
32
15
14
37
1.88
3088--3356
138
1.9
140
88
4
411
32
12
14
40
1.83
3218--5092
332
5.8
331
78
9
1616
32
16
15
36
1.89
6908--7316
52
8.1
53
85
11
449
32
27
37
3
1.73
6945--7074
45
2.9
46
93
3
219
38
20
36
3
1.71
6990--7058
20
3.2
20
64
25
50
37
20
39
2
1.68
6976--7056
25
3.4
25
69
19
75
40
19
35
3
1.70
7001--7077
20
3.7
20
73
17
75
41
18
36
3
1.69
7038--7317
52
5.4
52
96
0
490
28
30
38
2
1.69
8196--8320
45
2.8
45
92
0
196
31
20
26
22
1.98

Tables:   1

The End!