Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014555.1 Corchorus capsularis cultivar CVL-1 contig14576, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38001

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
577--622
22
2.0
23
87
4
67
13
13
17
56
1.67
722--799
29
2.7
29
89
2
120
15
21
17
44
1.86
925--985
29
2.1
29
81
6
70
42
13
18
26
1.86
3222--3280
26
2.3
26
96
0
109
55
18
16
8
1.66
15203--15255
27
2.0
27
96
0
97
24
15
33
26
1.95
15279--15324
22
2.1
22
100
0
92
41
4
8
45
1.55
27930--27959
9
3.4
9
95
4
53
0
6
0
93
0.35
32555--32625
28
2.5
27
75
8
70
36
26
21
15
1.93
33884--34009
54
2.3
54
93
0
216
18
24
19
37
1.94
33887--33979
24
3.6
24
70
20
71
17
23
20
38
1.93
33911--34010
30
3.6
29
70
20
95
17
25
21
37
1.94
33938--34095
75
2.1
75
92
0
262
15
25
20
38
1.91

Tables:   1

The End!