Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014564.1 Corchorus capsularis cultivar CVL-1 contig14585, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77682

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
236--2131
324
5.8
319
81
7
1911
36
15
12
34
1.86
2172--2223
15
3.3
15
84
12
68
61
0
3
34
1.14
2452--2511
29
2.1
29
84
6
77
63
6
6
23
1.43
37435--37545
55
2.0
55
100
0
222
27
25
14
32
1.94
39068--39120
16
3.3
16
74
10
63
60
15
13
11
1.59
39359--39398
21
1.9
21
84
0
53
82
2
15
0
0.77
47429--47453
1
25.0
1
100
0
50
0
0
0
100
0.00
56001--56036
6
6.0
6
93
0
63
36
50
13
0
1.43
70938--70977
20
2.0
20
95
0
71
42
20
17
20
1.89
71410--71552
69
2.1
69
98
0
277
26
13
26
32
1.94
72299--72328
15
2.0
15
100
0
60
0
33
6
60
1.23
74252--74342
46
2.0
47
88
2
139
35
14
13
37
1.85
76087--76117
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!