Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014566.1 Corchorus capsularis cultivar CVL-1 contig14587, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10618

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3277--3324
25
1.9
25
86
0
69
14
27
18
39
1.90
3454--3536
32
2.6
32
100
0
166
45
14
9
30
1.77
4010--4035
9
2.9
9
100
0
52
11
11
53
23
1.69
9049--9075
13
2.1
13
100
0
54
85
14
0
0
0.61
9481--9547
22
2.9
23
80
8
57
35
2
0
61
1.12
9693--9726
9
3.8
9
100
0
68
35
8
0
55
1.31
9680--9734
2
28.5
2
80
14
53
40
7
0
52
1.29
10279--10338
22
2.7
22
74
5
59
45
18
6
30
1.75
10380--10609
22
10.7
23
70
14
129
35
14
8
41
1.76

Tables:   1

The End!