Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014569.1 Corchorus capsularis cultivar CVL-1 contig14590, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34677

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--31
2
15.5
2
100
0
62
48
0
0
51
1.00
2527--2553
4
6.8
4
100
0
54
74
0
25
0
0.83
6150--6200
21
2.4
22
80
3
59
39
5
47
7
1.57
7778--7834
2
30.5
2
80
19
70
52
0
1
45
1.11
11691--11717
3
9.0
3
100
0
54
66
0
33
0
0.92
18687--18779
46
2.0
45
93
6
161
23
22
11
41
1.87
28936--29043
31
3.5
31
81
0
126
35
27
20
16
1.94

Tables:   1

The End!