Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014571.1 Corchorus capsularis cultivar CVL-1 contig14592, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51701

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15753--15787
18
2.0
17
94
5
61
5
25
11
57
1.56
25974--25998
12
2.1
12
100
0
50
40
16
0
44
1.47
27581--27905
179
1.8
179
94
1
580
23
24
28
24
2.00
45268--45347
29
2.7
30
82
3
99
38
15
26
20
1.91
46309--49843
335
10.7
332
86
5
4453
32
15
17
34
1.92
49838--49868
16
1.9
16
93
0
53
12
16
16
54
1.71
49852--51701
328
5.6
328
80
7
1822
32
14
17
35
1.90
49046--50646
806
2.0
802
90
2
2548
31
15
18
35
1.92
49853--51701
660
2.8
661
80
8
2086
32
14
17
35
1.90
49852--51701
339
5.6
333
80
7
1932
32
14
17
35
1.90

Tables:   1

The End!