Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014578.1 Corchorus capsularis cultivar CVL-1 contig14599, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46830

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10860--11216
177
2.0
178
84
4
470
20
27
15
37
1.92
13417--13445
1
29.0
1
100
0
58
0
0
100
0
0.00
19468--19526
31
1.9
31
100
0
118
47
11
6
33
1.67
20606--20631
6
4.3
6
100
0
52
0
65
15
19
1.27
21235--21267
2
16.5
2
93
0
57
48
0
0
51
1.00
21593--21713
2
60.5
2
94
0
215
48
48
1
0
1.17
21831--22105
109
2.5
109
93
4
455
38
10
1
49
1.47
22896--22930
2
17.5
2
100
0
70
48
0
0
51
1.00
23771--23802
6
5.2
6
92
7
55
15
15
31
37
1.89
41324--41353
14
2.1
14
100
0
60
30
13
30
26
1.94
41528--41578
22
2.3
22
100
0
102
21
13
29
35
1.92
43763--43803
21
2.0
21
95
0
73
21
4
48
24
1.69
44872--44914
21
2.0
21
90
0
68
37
23
18
20
1.94
44897--44929
16
2.1
16
94
0
57
36
30
12
21
1.90
45659--46775
330
3.3
326
74
9
951
32
14
16
36
1.89

Tables:   1

The End!