Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014589.1 Corchorus capsularis cultivar CVL-1 contig14610, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17790

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2440--2547
56
1.9
57
98
1
209
49
1
7
41
1.41
2656--2818
90
1.8
88
82
8
197
39
10
17
32
1.84
5354--5387
2
17.0
2
100
0
68
50
0
0
50
1.00
13696--13736
16
2.5
17
84
4
57
31
48
17
2
1.60
14479--14526
17
2.8
17
83
0
60
33
45
16
4
1.67
14518--14574
15
3.8
15
86
6
80
38
38
15
7
1.75
14518--14558
16
2.6
16
96
3
75
41
39
14
4
1.67
14479--14542
6
10.5
6
73
15
51
35
43
15
4
1.68
16655--16999
184
1.9
184
98
0
672
41
20
18
20
1.91

Tables:   1

The End!