Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014599.1 Corchorus capsularis cultivar CVL-1 contig14620, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5815

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
170--217
20
2.3
20
78
3
51
18
8
8
64
1.46
1357--1406
25
2.0
25
92
0
82
14
24
20
42
1.88
1400--2101
70
10.0
70
82
4
815
21
18
22
38
1.93
1775--1873
36
2.8
35
81
3
126
13
15
28
43
1.83
5692--5733
21
2.0
20
86
4
57
26
21
11
40
1.88

Tables:   1

The End!