Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014603.1 Corchorus capsularis cultivar CVL-1 contig14624, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7076

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4686--4735
7
6.9
7
85
14
66
86
0
14
0
0.58
4783--4827
15
3.3
14
84
12
58
77
0
15
6
0.96
4837--4991
75
2.1
74
89
3
231
36
7
20
35
1.81
4876--4947
31
2.4
31
85
2
92
41
8
16
33
1.78
4908--5058
44
3.4
44
88
4
214
39
7
19
34
1.79
5781--5824
16
2.8
15
89
6
61
79
0
20
0
0.73
5781--5824
5
8.4
5
87
7
61
79
0
20
0
0.73
6949--7052
35
2.9
36
72
2
102
15
14
26
43
1.85

Tables:   1

The End!