Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014604.1 Corchorus capsularis cultivar CVL-1 contig14625, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31066

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--106
49
2.0
49
91
4
158
20
19
23
35
1.96
135--230
49
2.0
49
87
0
138
20
18
26
34
1.96
1--301
119
2.5
119
89
0
440
21
19
22
36
1.95
179--881
70
10.0
70
88
1
994
20
19
22
37
1.94
185--881
141
5.0
140
91
1
1072
20
19
22
37
1.94
1267--1340
27
2.7
27
93
0
130
17
13
25
43
1.86
11355--11390
3
12.0
3
100
0
72
33
0
0
66
0.92
12345--12407
33
1.9
33
86
0
90
31
25
20
22
1.98
14864--14922
22
2.6
22
81
7
66
11
6
5
76
1.14
14893--14936
14
2.9
15
86
6
54
11
4
4
79
1.02
16063--16111
21
2.3
21
82
6
55
38
16
30
14
1.88
20169--20206
15
2.4
17
86
8
53
15
5
13
65
1.43
24251--24405
78
2.0
75
81
8
179
47
15
5
30
1.69
26436--26469
17
2.0
17
88
0
50
44
2
2
50
1.32

Tables:   1

The End!