Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014611.1 Corchorus capsularis cultivar CVL-1 contig14632, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24079

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
478--720
107
2.3
107
78
5
249
18
19
27
34
1.95
4941--5357
35
11.8
35
88
4
588
38
10
19
31
1.86
4860--5358
105
4.8
104
86
5
570
38
10
19
31
1.86
5363--5502
58
2.5
57
80
9
144
41
9
22
27
1.84
13291--13347
3
19.0
3
100
0
114
66
0
0
33
0.92
16633--16713
29
2.7
29
83
7
92
34
9
23
32
1.88
19271--19342
36
2.0
36
91
5
119
20
27
23
27
1.99
23394--23446
21
2.6
21
87
3
72
28
32
32
7
1.85

Tables:   1

The End!