Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014617.1 Corchorus capsularis cultivar CVL-1 contig14638, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15570

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7116--7335
108
2.0
108
98
0
422
21
13
18
47
1.82
7615--7921
14
21.0
14
67
18
128
38
8
1
51
1.41
7617--7802
44
4.2
43
82
10
207
37
6
2
53
1.40
7611--7802
88
2.2
88
85
5
255
36
6
2
54
1.39
7757--7834
30
2.6
30
85
2
102
37
11
1
50
1.47
7721--7951
74
3.1
73
88
3
338
38
9
1
50
1.43
7625--7988
118
3.1
117
80
9
409
37
8
1
51
1.44
7782--7876
44
2.2
44
92
1
165
42
9
0
48
1.35
7831--7988
30
5.3
30
75
18
134
37
8
1
51
1.44
7861--8009
44
3.3
44
85
2
190
35
9
2
53
1.45
7776--7937
17
10.9
15
70
25
78
39
9
0
50
1.36
14193--14235
22
1.9
23
95
4
79
25
23
13
37
1.92

Tables:   1

The End!