Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014634.1 Corchorus capsularis cultivar CVL-1 contig14655, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43101

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
546--576
16
1.9
16
100
0
62
51
0
0
48
1.00
1162--1197
17
2.1
17
100
0
72
61
5
5
27
1.41
12039--12100
20
2.9
22
73
9
74
45
4
0
50
1.23
22194--22235
20
2.1
20
95
0
75
26
26
21
26
1.99
30713--30908
60
3.3
60
88
2
295
36
19
17
26
1.94
30806--30910
31
3.5
31
70
15
101
40
20
15
23
1.90
30941--31039
31
3.3
29
72
16
94
25
20
18
36
1.95
30941--31101
60
2.7
60
85
1
207
29
18
14
36
1.91

Tables:   1

The End!