Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014641.1 Corchorus capsularis cultivar CVL-1 contig14662, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4740

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--47
2
21.5
2
100
0
86
48
0
0
51
1.00
2267--2299
2
16.5
2
93
0
57
48
3
0
48
1.17
3336--3385
19
2.6
19
82
17
52
30
4
2
64
1.23
3553--3717
22
7.3
22
74
10
100
32
8
20
38
1.82
3748--4054
22
13.8
23
68
17
134
40
9
16
33
1.80
3930--4076
44
3.3
44
72
7
129
44
10
12
32
1.77
4179--4563
22
17.5
22
67
15
136
36
10
15
37
1.82
4303--4382
23
3.5
23
81
1
90
36
10
15
38
1.80
4574--4618
20
2.1
22
84
8
58
53
4
13
28
1.59

Tables:   1

The End!