Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014642.1 Corchorus capsularis cultivar CVL-1 contig14663, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24813

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2401--2426
12
2.2
12
100
0
52
30
7
0
61
1.24
11405--11459
17
3.1
17
89
5
74
45
5
1
47
1.36
11412--11462
2
26.0
2
86
11
70
47
3
0
49
1.20
12594--12671
23
3.2
23
72
12
66
75
5
14
5
1.14
12608--12681
26
2.6
27
79
16
80
77
5
14
2
1.07
12605--12688
11
7.5
11
75
17
57
76
4
16
2
1.07
12608--12687
29
2.8
26
72
22
72
76
5
16
2
1.07
12604--12690
27
2.9
29
77
13
81
75
4
17
2
1.07
12740--12800
26
2.3
26
94
0
104
21
40
29
8
1.82
15998--16072
29
2.6
30
79
14
86
40
16
22
21
1.91
18783--18829
14
3.4
14
70
5
51
27
8
2
61
1.36
18680--18948
151
1.8
148
84
8
348
33
9
4
52
1.54
19258--19758
163
3.0
167
84
5
672
21
13
24
40
1.89

Tables:   1

The End!