Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014644.1 Corchorus capsularis cultivar CVL-1 contig14665, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27256

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4476--4767
22
13.7
22
70
18
140
39
16
7
36
1.78
4648--4768
61
2.0
61
84
14
160
42
13
7
36
1.72
4849--5704
22
38.6
22
68
13
224
35
14
9
40
1.78
4827--5674
44
19.1
44
70
13
302
36
14
9
39
1.78
5422--5505
43
1.9
44
85
7
118
32
14
10
42
1.80
5466--5588
47
2.7
45
77
10
108
32
10
9
47
1.71
5903--5932
15
1.9
16
93
6
53
16
0
10
73
1.09
8367--8433
26
2.6
25
77
20
66
37
0
5
56
1.24
9014--9092
39
2.1
38
93
6
135
41
6
17
34
1.75
12842--12890
17
2.7
19
78
12
59
67
2
6
24
1.24
12896--12920
13
1.9
13
100
0
50
76
8
0
16
1.02
15598--15628
3
10.3
3
100
0
62
32
32
0
35
1.58
21139--21216
40
2.0
40
86
0
111
38
15
15
30
1.88

Tables:   1

The End!