Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014645.1 Corchorus capsularis cultivar CVL-1 contig14666, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7306

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1000--1082
22
3.8
22
74
3
60
38
10
13
37
1.79
1202--1250
22
2.2
22
88
0
71
40
10
18
30
1.84
1658--1721
22
2.9
22
92
0
110
34
7
18
39
1.80
1934--1977
22
2.0
22
81
0
52
27
13
9
50
1.72
1964--2039
21
3.6
21
72
12
66
39
9
18
32
1.82
2169--2252
29
2.8
29
80
7
96
28
11
28
30
1.92
2513--2578
22
3.0
22
86
0
87
40
10
16
31
1.83
3281--3314
3
11.3
3
90
0
50
58
0
2
38
1.13
3372--3412
2
20.5
2
100
0
82
48
0
0
51
1.00
4953--4986
17
2.0
17
100
0
68
35
23
5
35
1.79
5741--5952
116
1.8
114
85
5
300
41
10
8
40
1.69

Tables:   1

The End!