Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014652.1 Corchorus capsularis cultivar CVL-1 contig14673, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18257

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--30
2
13.5
2
100
0
54
48
0
0
51
1.00
1879--1918
21
1.9
21
100
0
80
32
12
35
20
1.90
2907--2965
19
3.0
20
77
7
66
28
16
13
40
1.87
8140--8275
41
3.3
41
82
8
186
33
15
17
33
1.91
9456--9489
17
1.9
18
94
5
61
58
8
11
20
1.59
10170--10199
7
4.3
7
95
0
51
3
16
26
53
1.59
12249--12276
14
2.0
14
100
0
56
28
0
0
71
0.86
12248--12281
17
2.0
17
100
0
68
29
0
0
70
0.87
12248--12285
3
13.0
3
88
5
60
28
0
0
71
0.87

Tables:   1

The End!