Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014657.1 Corchorus capsularis cultivar CVL-1 contig14678, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5057

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
990--1069
27
2.9
27
80
10
90
18
18
22
40
1.92
2910--2958
16
3.1
16
85
2
73
32
8
24
34
1.85
3729--3831
49
2.1
49
83
7
129
39
4
19
35
1.73
3752--3857
49
2.2
49
84
0
131
40
5
19
33
1.75
4669--4783
54
2.1
53
88
4
167
48
7
18
25
1.74

Tables:   1

The End!