Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014660.1 Corchorus capsularis cultivar CVL-1 contig14681, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30740

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3391--3443
27
2.0
27
85
7
74
39
9
1
49
1.46
11007--11088
33
2.8
27
67
21
65
23
15
8
52
1.70
10866--11185
145
2.2
145
90
1
498
23
17
7
52
1.69
11027--11187
85
1.9
83
83
8
211
20
16
8
54
1.67
12625--12665
2
21.5
2
81
18
52
46
0
2
51
1.14
14042--14269
41
5.5
40
75
13
183
21
9
27
41
1.84
14038--14321
84
3.4
85
83
5
362
22
9
26
41
1.84
23242--23276
2
18.5
2
88
11
56
51
0
0
48
1.00
24211--24236
3
8.7
3
100
0
52
34
0
0
65
0.93
24325--24393
21
3.3
21
73
13
70
46
11
2
39
1.55
26249--26275
2
13.5
2
100
0
54
48
0
0
51
1.00
27144--27177
2
17.5
2
93
6
61
50
0
0
50
1.00
27801--27842
19
2.3
18
84
8
57
61
0
4
33
1.17
27806--27842
19
2.0
19
89
5
58
64
0
2
32
1.07

Tables:   1

The End!