Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014669.1 Corchorus capsularis cultivar CVL-1 contig14690, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34680

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3576--3611
18
2.0
18
100
0
72
66
11
11
11
1.45
6900--7131
22
10.9
22
75
13
132
22
18
4
54
1.62
6897--7149
129
2.0
128
83
6
325
22
18
4
54
1.62
7178--7273
31
3.0
30
84
6
120
23
14
9
52
1.71
16419--16537
55
2.2
54
87
6
168
47
14
21
15
1.81
28147--28175
3
10.0
3
92
7
51
65
0
0
34
0.93
28517--28562
2
23.5
2
86
4
67
50
0
4
45
1.21
30639--30694
27
2.1
27
86
3
78
19
14
7
58
1.58
30646--30704
27
2.3
25
81
18
77
20
13
11
54
1.70
31228--31298
37
1.9
37
88
5
108
36
14
8
40
1.76
33975--34006
15
2.1
15
94
0
55
50
12
21
15
1.77

Tables:   1

The End!