Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001467.1 Corchorus capsularis cultivar CVL-1 contig01467, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5214

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3886--3941
22
2.6
21
86
8
85
35
12
19
32
1.89
3886--3986
22
4.5
22
78
11
80
32
10
19
36
1.87
4071--4150
22
3.8
22
67
14
60
35
7
20
37
1.81
4134--4415
22
12.8
21
67
19
105
42
9
15
33
1.78
4269--4415
66
2.2
66
79
7
156
42
9
14
34
1.78
4540--5118
22
26.7
22
67
14
168
39
10
14
35
1.81
4540--4834
44
6.9
44
75
14
185
40
9
14
34
1.79
4901--4964
23
2.9
22
83
2
74
29
14
17
39
1.88
4902--4987
45
1.9
45
80
4
102
32
13
16
37
1.88

Tables:   1

The End!