Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014671.1 Corchorus capsularis cultivar CVL-1 contig14692, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18170

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5707--5899
35
5.3
35
68
18
126
37
17
7
37
1.78
5772--5973
21
10.6
21
66
20
77
39
16
4
39
1.71
5737--6012
56
4.9
56
96
0
471
38
17
5
38
1.73
5710--5885
19
9.5
19
64
21
61
37
18
7
36
1.80
5881--5976
21
4.9
21
71
17
89
40
14
2
42
1.57
9757--10014
35
7.3
35
82
6
283
28
24
15
31
1.96
10834--11027
54
3.6
54
96
0
352
14
31
14
39
1.86
11173--11217
3
15.0
3
90
0
72
37
0
0
62
0.96
15093--15128
19
1.9
18
88
5
54
41
2
22
33
1.68
16216--16252
19
2.0
18
89
5
56
40
8
21
29
1.82

Tables:   1

The End!