Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014673.1 Corchorus capsularis cultivar CVL-1 contig14694, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36918

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
136--257
59
2.1
59
92
0
199
28
7
23
40
1.82
1486--1522
19
2.0
18
89
5
56
40
8
21
29
1.82
8914--8959
11
4.3
11
73
15
51
30
19
17
32
1.95
12964--13019
27
2.1
27
96
0
103
23
21
16
39
1.92
20462--20497
18
2.0
18
94
0
63
25
11
27
36
1.90
31429--31453
6
4.2
6
100
0
50
32
0
16
52
1.44
35180--35265
15
5.5
15
80
10
93
17
6
34
40
1.77
35190--35272
16
5.2
16
81
8
107
15
7
36
40
1.75
35175--35272
32
3.1
32
88
5
146
15
7
36
40
1.74
35733--35784
26
2.0
26
84
0
68
48
0
1
50
1.12

Tables:   1

The End!