Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014676.1 Corchorus capsularis cultivar CVL-1 contig14697, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9633

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
802--973
36
4.8
36
74
9
145
36
29
16
17
1.92
802--1128
36
9.2
36
68
12
142
37
28
16
17
1.91
948--1172
71
3.2
71
87
1
317
38
27
16
17
1.91
798--1071
107
2.6
107
85
2
347
37
28
16
17
1.92
3591--3641
26
1.9
27
88
11
79
35
19
7
37
1.81
3591--3642
14
3.9
12
76
18
50
34
19
7
38
1.80
3711--3806
41
2.3
42
85
8
135
11
20
8
59
1.57
6823--7305
35
13.9
35
91
0
754
31
17
10
39
1.85
7042--7106
21
3.4
21
66
27
63
32
18
12
36
1.88
7055--7111
16
3.4
16
68
13
51
31
22
10
35
1.88

Tables:   1

The End!