Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001468.1 Corchorus capsularis cultivar CVL-1 contig01468, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4368

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
792--828
19
1.9
19
94
0
65
27
8
0
64
1.21
1909--1984
22
3.5
22
80
10
84
35
13
17
34
1.88
1992--2038
22
2.1
22
84
0
58
27
6
21
44
1.76
2069--2439
22
16.8
22
71
12
224
39
9
16
35
1.81
2074--3131
44
24.4
43
66
15
222
38
9
15
35
1.81
2546--2596
19
2.6
20
87
6
86
41
11
21
25
1.87
2584--3132
22
24.7
22
68
15
168
39
10
13
36
1.79
2739--2845
23
4.7
23
81
2
101
39
10
13
37
1.78
2914--2999
45
1.9
45
80
4
102
32
11
17
38
1.86
3028--3073
21
2.1
23
88
8
69
58
4
6
30
1.43
3652--3687
12
3.0
12
87
0
54
16
16
8
58
1.61
3652--3686
18
1.9
18
88
0
52
17
17
5
60
1.55
3700--3817
42
2.9
41
78
15
129
20
25
16
37
1.93

Tables:   1

The End!