Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014684.1 Corchorus capsularis cultivar CVL-1 contig14705, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20403

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5006--5039
14
2.3
15
95
5
61
14
5
23
55
1.61
9979--10003
10
2.5
10
100
0
50
60
0
8
32
1.26
10914--10956
21
2.1
20
86
4
59
48
6
2
41
1.43
11443--11515
26
2.8
26
77
8
76
38
1
1
58
1.15
12354--12392
20
1.9
20
89
5
60
58
7
2
30
1.39
12567--12595
2
14.5
2
100
0
58
51
0
0
48
1.00
14009--14050
19
2.3
18
80
15
50
33
4
0
61
1.17

Tables:   1

The End!