Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014698.1 Corchorus capsularis cultivar CVL-1 contig14719, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31094

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--87
33
2.5
33
83
7
100
11
30
36
20
1.89
5422--5450
10
2.9
10
100
0
58
20
0
0
79
0.74
13374--13599
49
4.6
49
77
6
208
43
19
21
16
1.88
13566--14091
41
13.0
41
80
8
521
38
20
26
14
1.92
13558--14087
161
3.3
157
78
9
550
37
20
26
15
1.92
13610--14086
121
4.0
118
82
8
427
37
21
26
14
1.92
13566--14084
202
2.6
196
80
10
582
37
21
26
14
1.92
14770--15100
50
6.5
51
76
8
248
36
16
5
41
1.72
14811--15105
103
2.9
100
76
10
251
36
16
6
40
1.75
14568--15160
50
11.7
49
70
14
234
36
15
5
42
1.69
16768--16851
12
7.5
12
74
12
54
22
40
28
8
1.83

Tables:   1

The End!