Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014699.1 Corchorus capsularis cultivar CVL-1 contig14720, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24712

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--424
50
8.6
50
83
3
518
17
29
17
35
1.93
1--424
99
4.3
98
83
6
509
17
29
17
35
1.93
4840--4873
2
17.0
2
87
0
50
55
0
0
44
0.99
6033--6079
18
2.6
18
79
0
58
38
8
34
19
1.82
6091--6164
6
12.3
6
94
0
121
36
14
47
1
1.53
7081--7111
15
2.1
15
93
0
53
32
9
16
41
1.80
14154--14211
28
2.1
28
100
0
116
39
15
17
27
1.90
16948--16993
19
2.3
20
88
7
67
73
0
23
2
0.94
16952--16993
17
2.3
20
80
19
56
73
0
23
2
0.94
16947--16986
17
2.5
15
88
8
53
75
0
22
2
0.93
23680--23726
2
23.5
2
91
0
76
51
0
2
46
1.13

Tables:   1

The End!