Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014709.1 Corchorus capsularis cultivar CVL-1 contig14730, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18230

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
506--577
29
2.4
29
81
2
81
38
26
11
23
1.88
4330--4437
31
3.5
31
80
7
132
25
25
18
30
1.98
4330--4414
29
2.8
30
85
3
118
27
23
17
31
1.97
7833--7932
31
3.3
31
80
8
134
33
20
23
24
1.97
8376--8550
93
1.9
93
96
2
325
24
12
20
42
1.86
10288--10381
33
2.8
35
73
6
88
12
39
34
13
1.83
10444--10542
33
3.0
33
82
8
139
12
32
40
15
1.84
15527--15562
11
3.3
11
100
0
72
8
8
0
83
0.82
15572--15752
73
2.5
73
95
0
326
33
20
18
27
1.96

Tables:   1

The End!