Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014711.1 Corchorus capsularis cultivar CVL-1 contig14732, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3075

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
342--554
112
1.9
111
81
2
257
30
20
23
26
1.99
459--876
158
2.6
157
77
8
407
28
21
21
29
1.98
885--1305
158
2.7
157
77
10
426
27
22
20
29
1.99
1--2164
428
5.1
428
88
2
3135
27
21
22
29
1.99
1198--1409
111
1.9
111
85
1
291
28
23
21
26
1.99
1331--1704
161
2.3
158
79
5
392
28
22
20
28
1.99
1634--1847
111
1.9
111
81
0
257
31
21
22
24
1.98
1861--2456
158
3.8
156
80
5
687
26
22
22
29
1.99
1774--2480
316
2.2
317
89
0
1083
26
22
21
28
1.99
2381--2591
111
1.9
111
80
3
246
29
21
20
27
1.98
1309--2909
744
2.1
749
86
2
2215
27
21
22
28
1.99
2802--3013
111
1.9
111
83
0
271
28
22
21
27
1.99
2057--3068
429
2.4
427
88
1
1506
27
21
21
28
1.99
2057--3068
428
2.4
426
88
2
1497
27
21
21
28
1.99

Tables:   1

The End!