Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014724.1 Corchorus capsularis cultivar CVL-1 contig14745, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23369

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1612--1654
2
21.5
2
90
9
70
46
2
0
51
1.13
5999--6061
19
3.2
19
80
12
74
42
23
4
28
1.74
8207--8237
11
2.8
11
90
0
53
45
6
0
48
1.28
11833--11875
17
2.4
18
84
3
61
23
4
30
41
1.74
12546--12598
18
3.3
18
65
29
55
20
47
24
7
1.76
12536--12598
30
2.1
30
93
0
108
22
44
23
9
1.82
19058--19120
30
2.1
30
90
0
99
23
44
22
9
1.82
19898--19939
16
2.7
15
89
7
66
33
16
11
38
1.86

Tables:   1

The End!