Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014729.1 Corchorus capsularis cultivar CVL-1 contig14750, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6865

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
142--198
13
4.3
12
79
16
51
28
1
8
61
1.36
1181--1295
22
5.2
22
73
12
74
32
8
20
39
1.83
1254--1305
22
2.4
22
77
6
61
32
5
19
42
1.75
1406--1487
22
3.8
21
77
3
83
40
10
12
36
1.78
1473--1550
22
3.5
22
82
5
77
43
8
15
32
1.78
1497--1548
22
2.4
22
93
3
88
46
5
11
36
1.64
1657--2126
22
21.6
22
68
12
197
36
10
16
36
1.82
1989--2082
45
2.1
44
82
5
109
34
11
15
38
1.84

Tables:   1

The End!