Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014736.1 Corchorus capsularis cultivar CVL-1 contig14757, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35335

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2356--2401
11
4.3
11
81
10
51
36
17
6
39
1.76
17940--17981
11
3.7
12
90
9
70
38
7
4
50
1.51
19164--19203
18
2.2
18
86
13
55
47
2
20
30
1.63
20642--20674
17
2.0
17
88
5
50
30
6
18
45
1.73
25452--25486
8
4.5
8
89
3
54
88
0
0
11
0.51
29959--30035
23
3.3
23
66
7
64
54
10
15
19
1.69
30144--30220
26
3.1
26
64
17
72
54
11
14
19
1.70
30140--30215
23
3.2
23
64
10
62
55
11
13
19
1.68
29796--30302
189
2.7
190
97
1
955
55
13
12
18
1.68
31512--31540
2
14.5
2
100
0
58
51
0
0
48
1.00
34196--34222
14
1.9
14
100
0
54
44
14
3
37
1.63
34253--34330
22
3.6
21
76
8
75
41
7
15
35
1.76
34454--34994
22
24.7
22
68
13
161
39
10
14
35
1.81
34454--34905
44
10.3
44
71
10
180
38
10
15
36
1.82
35114--35146
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!