Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014739.1 Corchorus capsularis cultivar CVL-1 contig14760, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17181

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--289
50
5.6
51
78
3
317
37
16
4
41
1.70
1--300
101
3.0
100
90
3
476
36
16
5
41
1.70
2733--2800
27
2.5
27
85
4
84
35
27
22
14
1.93
2748--2803
27
2.1
27
93
0
94
33
23
28
14
1.94
3959--4022
17
3.6
17
76
12
65
7
18
17
56
1.64
3935--4018
37
2.3
36
91
4
132
5
19
14
60
1.54
3942--4005
20
3.4
20
70
14
64
6
20
15
57
1.59
3955--4034
37
2.2
37
84
4
99
11
17
13
57
1.65
11676--11875
63
3.2
63
74
4
197
43
21
11
24
1.84
15481--15536
15
3.9
15
74
9
62
16
21
5
57
1.59
15515--15750
21
11.0
20
73
15
179
19
19
7
53
1.67
15532--15743
85
2.5
85
80
9
234
18
20
7
53
1.69
16041--16387
55
6.5
55
92
5
584
25
17
7
50
1.71
17144--17175
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!