Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014741.1 Corchorus capsularis cultivar CVL-1 contig14762, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52828

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18936--18962
13
2.1
13
100
0
54
70
0
14
14
1.17
24271--24317
23
2.0
23
95
0
85
31
14
14
38
1.87
25735--25776
16
2.9
14
80
13
57
33
16
11
38
1.86
26687--26726
20
2.0
20
85
0
53
15
7
10
67
1.41
28768--28810
13
3.2
13
90
3
68
74
0
23
2
0.93
30882--30924
13
3.2
13
90
3
68
74
0
23
2
0.93
32398--32430
13
2.5
13
86
13
50
0
18
0
81
0.68
32398--32431
14
2.5
13
81
9
50
0
17
0
82
0.67
32915--32956
17
2.5
17
80
0
57
59
23
4
11
1.51
38020--38049
13
2.2
14
94
5
53
76
0
20
3
0.92

Tables:   1

The End!