Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014742.1 Corchorus capsularis cultivar CVL-1 contig14763, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36474

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17842--17885
22
2.0
22
86
0
61
25
25
20
29
1.99
17837--17940
52
2.0
52
90
0
163
23
27
21
27
1.99
19343--19391
24
2.0
25
84
4
64
59
18
6
16
1.57
23720--23856
73
1.9
73
80
6
161
25
3
26
44
1.70
29568--29621
14
4.2
13
76
19
51
44
1
7
46
1.42
31749--31819
35
2.0
35
91
0
115
38
15
14
32
1.87
35679--35765
45
1.9
45
95
0
156
26
20
19
33
1.97
36269--36326
28
2.0
31
86
10
86
25
15
13
44
1.83

Tables:   1

The End!