Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014743.1 Corchorus capsularis cultivar CVL-1 contig14764, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14117

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1678--1703
2
13.0
2
100
0
52
50
0
0
50
1.00
3361--3397
2
18.5
2
100
0
74
51
48
0
0
1.00
3397--3426
2
15.0
2
92
0
51
50
3
0
46
1.18
4438--4492
29
1.9
28
88
3
83
38
25
9
27
1.86
5049--5207
80
2.0
80
96
0
291
37
7
15
38
1.76
5565--5604
21
1.9
21
84
0
53
52
12
20
15
1.74
6317--7626
442
3.0
436
83
4
1530
27
12
17
42
1.84
8241--8278
14
2.5
16
91
8
62
42
2
0
55
1.14

Tables:   1

The End!