Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014744.1 Corchorus capsularis cultivar CVL-1 contig14765, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24564

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1190--1271
27
3.0
27
94
0
146
23
28
10
37
1.88
5545--5571
2
13.5
2
100
0
54
48
0
0
51
1.00
6595--6674
31
2.5
31
89
4
115
30
25
17
27
1.97
6615--6698
31
2.7
31
83
0
105
25
26
26
22
2.00
7783--7852
21
3.3
21
80
8
79
41
17
5
35
1.73
8243--8283
20
2.0
22
85
9
59
58
2
0
39
1.11
9910--9999
16
6.1
16
67
21
70
51
6
4
37
1.49
9922--10001
30
2.8
30
83
9
87
50
6
5
38
1.50
23609--23652
21
2.2
20
87
4
61
29
6
6
56
1.51
23761--23804
21
2.2
20
87
4
61
29
6
6
56
1.51
23574--23879
152
2.0
153
99
0
605
39
7
13
38
1.74

Tables:   1

The End!